Alfieri, James M; Hingoranee, Reina; Athrey, Giridhar N; Blackmon, Heath. “Domestication is associated with increased interspecific hybrid compatibility in landfowl (order: Galliformes). Journal of Heredity, Volume 115, Number 1, Pages 1-10, 2024.”
Smith, Jacqueline; Alfieri, James M; Anthony, Nick; Arensburger, Peter; Athrey, Giridhar N; Balacco, Jennifer; Balic, Adam; Bardou, Philippe; Barela, Paul; Bigot, Yves; others. “Fourth report on chicken genes and chromosomes 2022. Cytogenetic and Genome Research, Volume 162, Numbers 8-9, Pages 405-528, 2023.”
Smith, Jacqueline; Alfieri, James M; Anthony, Nick; Arensburger, Peter; Athrey, Giridhar N; Balacco, Jennifer; Balic, Adam; Bardou, Philippe; Barela, Paul; Hanotte, Olivier; others. “Supplementary Material for: Fourth Report on Chicken Genes and Chromosomes 2022, 2023.”
Rice, Edward S; Alberdi, Antton; Alfieri, James; Athrey, Giridhar; Balacco, Jennifer R; Bardou, Philippe; Blackmon, Heath; Charles, Mathieu; Cheng, Hans H; Fedrigo, Olivier; others. “A pangenome graph reference of 30 chicken genomes allows genotyping of large and complex structural variants. BMC biology, Volume 21, Number 1, Pages 267, 2023.”
Johnson, Jeff A; Athrey, Giridhar; Anderson, Clifford M; Bell, Douglas A; Dixon, Andrew; Kumazawa, Yoshinori; Maechtle, Tom; Meeks, Garrett W; Mindell, David; Nakajima, Keiya; others. “Whole-genome survey reveals extensive variation in genetic diversity and inbreeding levels among peregrine falcon subspecies. Ecology and Evolution, Volume 13, Number 7, Pages e10347, 2023.”
Johnson, Jeff A; Novak, Ben; Athrey, Giridhar; Sharo, Andrew G; Chase, Tom; Toepfer, John. “Phylogenomics of the extinct Heath Hen provides support for sex-biased introgression among extant prairie grouse. Molecular Phylogenetics and Evolution, Volume 189, Pages 107927, 2023.”
Huang, Xinyue; Kaufman, Phillip E; Athrey, Giridhar N; Fredregill, Chris; Alvarez, Christina; Shetty, Vinaya; Slotman, Michel A. “Potential key genes involved in metabolic resistance to malathion in the southern house mosquito, Culex quinquefasciatus, and functional validation of CYP325BC1 and CYP9M12 as candidate genes using RNA interference. BMC genomics, Volume 24, Number 1, Pages 1-15, 2023.”
Huang, Xinyue; Athrey, Giridhar N; Kaufman, Phillip E; Fredregill, Chris; Slotman, Michel A. “Effective population size of Culex quinquefasciatus under insecticide-based vector management and following Hurricane Harvey in Harris County, Texas. Frontiers in Genetics, Volume 14, 2023.”
Fiddaman, Steven R; Klopp, Christophe; Charles, Mathieu; Bardou, Philippe; Lebrasseur, Ophélie; Derks, Martijn FL; Schauer, Jens; Reimer, Christian; Geibel, Johannes; Gheyas, Almas; others. “Chicken Genomic Diversity consortium: large-scale genomics to unravel the origins and adaptations of chickens. Cytogenetic and Genome Research, 2023.”
Alfieri, James M; Johnson, Taryn; Linderholm, Anna; Blackmon, Heath; Athrey, Giridhar N. “Genomic investigation refutes record of most diverged avian hybrid. Ecology and Evolution, Volume 13, Number 1, Pages e9689, 2023.”
Hubert, Shawna; Athrey, Giridhar. “Transcriptomic signals of mitochondrial dysfunction and OXPHOS dynamics in fast-growth chicken. PeerJ, Volume 10, Pages e13364, 2022.”
Alfieri, James M; Wang, Guosong; Jonika, Michelle M; Gill, Clare A; Blackmon, Heath; Athrey, Giridhar N. “A primer for single-cell sequencing in non-model organisms. Genes, Volume 13, Number 2, Pages 380, 2022.”
Ibrahim, Mohamed MA; Nelson, Jill R; Archer, Gregory S; Athrey, Giridhar. “Effects of monochromatic lighting during incubation and vaccination on the splenic transcriptome profiles of chicken. Frontiers in Genetics, Volume 12, Pages 628041, 2021.”
Hauser, Samantha S; Athrey, Giridhar; Leberg, Paul L. “Waste not, want not: Microsatellites remain an economical and informative technology for conservation genetics. Ecology and Evolution, Volume 11, Number 22, Pages 15800-15814, 2021.”
Athrey, Giridhar; Popkin-Hall, Zachary R; Takken, Willem; Slotman, Michel A. “The expression of chemosensory genes in male maxillary palps of Anopheles coluzzii (Diptera: Culicidae) and An. quadriannulatus. Journal of Medical Entomology, Volume 58, Number 3, Pages 1012-1020, 2021.”
Williams, Travis; Athrey, Giridhar. “Cloacal swabs are unreliable sources for estimating lower gastro-intestinal tract microbiota membership and structure in broiler chickens. Microorganisms, Volume 8, Number 5, Pages 718, 2020.”
Nelson, Jill R; Sobotik, Eric B; Athrey, Giridhar; Archer, Gregory S. “Effects of supplementing yeast fermentate in the feed or drinking water on stress susceptibility, plasma chemistry, cytokine levels, antioxidant status, and stress-and immune-related gene expression of broiler chickens. Poultry science, Volume 99, Number 7, Pages 3312-3318, 2020.”
Nelson, Jill R; Ibrahim, Mohamed MA; Sobotik, Eric B; Athrey, Giridhar; Archer, Gregory S. “Effects of yeast fermentate supplementation on cecal microbiome, plasma biochemistry and ileal histomorphology in stressed broiler chickens. Livestock Science, Volume 240, Pages 104149, 2020.”
Hubert, Shawna M; Athrey, Giridhar. “Energy metabolism and sources of oxidative stress in wooden breast-a review. F1000Research, Volume 9, Pages 319, 2020.”
Athrey, Giridhar. “Poultry genetics and breeding. In Animal Agriculture, Pages 317-330, Elsevier, 2020.”
Athrey, Giridhar; Popkin-Hall, Zachary; Cosme, Luciano Veiga; Takken, Willem; Slotman, Michel Andre. “Species and sex-specific chemosensory gene expression in Anopheles coluzzii and An. quadriannulatus antennae. Parasites & vectors, Volume 13, Pages 1-15, 2020.”
Al-Ajeeli, Morouj N; Hubert, Shawna M; Leyva-Jimenez, Hector; Hashim, Mohammed M; Abdaljaleel, Raghad A; Alsadwi, Akhil M; Athrey, Giridhar; Bailey, Christopher A. “Impacts of dietary protein and prebiotic inclusion on liver and spleen gene expression in hy-line brown caged layers. Animals, Volume 10, Number 3, Pages 453, 2020.”
Aguirre, Maria E; Leyva-Jimenez, Hector; Travis, Ryan; Lee, Jason T; Athrey, Giridhar; Alvarado, Christine Z. “Evaluation of growth production factors as predictors of the incidence and severity of white striping and woody breast in broiler chickens. Poultry science, Volume 99, Number 7, Pages 3723-3732, 2020.”
Shivanagoudra, Siddanagouda R; Perera, Wilmer H; Perez, Jose L; Athrey, Giridhar; Sun, Yuxiang; Jayaprakasha, GK; Patil, Bhimanagouda S. “Cucurbitane-type compounds from Momordica charantia: Isolation, in vitro antidiabetic, anti-inflammatory activities and in silico modeling approaches. Bioorganic Chemistry, Volume 87, Pages 31-42, 2019.”
Shivanagoudra, Siddanagouda R; Perera, Wilmer H; Perez, Jose L; Athrey, Giridhar; Sun, Yuxiang; Wu, Chia Shan; Jayaprakasha, GK; Patil, Bhimanagouda S. “In vitro and in silico elucidation of antidiabetic and anti-inflammatory activities of bioactive compounds from Momordica charantia L. Bioorganic & Medicinal Chemistry, Volume 27, Number 14, Pages 3097-3109, 2019.”
Shivanagoudra, Siddanagouda; Perera, Wilmer; Perez, Jose; Athrey, Giridhar; Sun, Yuxiang; Wu, Chia Shan; Jayaprakasha, Guddadarang; Patil, Bhimu. “Antidiabetic and anti-inflammatory potential of isolated compounds from bitter melon: In vitro and in silico approaches. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, Volume 258, AMER CHEMICAL SOC 1155 16TH ST, NW, WASHINGTON, DC 20036 USA, 2019.”
Klerks, Paul L; Athrey, Giridhar N; Leberg, Paul L. “Response to selection for increased heat tolerance in a small fish species, with the response decreased by a population bottleneck. Frontiers in Ecology and Evolution, Volume 7, Pages 270, 2019.”
Hubert, Shawna Marie; Al-Ajeeli, Morouj; Bailey, Christopher A; Athrey, Giridhar. “The role of housing environment and dietary protein source on the gut microbiota of chicken. Animal, Volume 9, Number 12, Pages 1085, 2019.”
Hieke, Anne-Sophie Charlotte; Hubert, Shawna Marie; Athrey, Giridhar. “Circadian disruption and divergent microbiota acquisition under extended photoperiod regimens in chicken. PeerJ, Volume 7, Pages e6592, 2019.”
Vuia-Riser, Jennifer; Hieke, Anne-Sophie Charlotte; Athrey, Giridhar; Kerth, Chris R; Taylor, T Matthew. “Comparison of Buffered Peptone Water to Neutralizing Buffered Peptone Water for Salmonella Detection from Commercially Slaughtered Whole Chicken Carcasses and Cut Chicken Parts. Food Protection Trends, Volume 38, Number 6, 2018.”
Meyers, Jacob; Athrey, Giri; Fuseini, Godwin; Matias, Abrahan; Garcia, Guillermo; Overgaard, Hans; Kulkarni, Vani; Reddy, Vamsi; Schwabe, Christopher; Kleinschmidt, Immo; others. “THE GENETIC BASIS FOR OUTDOOR HOST-SEEKING BEHAVIOR IN ANOPHELES COLUZZII DURING THE BIOKO ISLAND MALARIA CONTROL PROJECT. AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, Volume 99, Number 4, Pages 494-495, AMER SOC TROP MED & HYGIENE 8000 WESTPARK DR, STE 130, MCLEAN, VA 22101 USA, 2018.”
Levy, Julien; Tamborindeguy, Cecilia; Athrey, Giridhar; Scheuring, Douglas C; Koym, Jeffrey W; Miller, J Creighton. “Transcriptome of Russet Norkotah and its clonal selection, TXNS278. BMC Research Notes, Volume 11, Pages 1-3, 2018.”
Athrey, Giridhar; Faust, Nikolas; Hieke, Anne-Sophie Charlotte; Brisbin, I Lehr. “Effective population sizes and adaptive genetic variation in a captive bird population. PeerJ, Volume 6, Pages e5803, 2018.”
Athrey, Giridhar; Popkin-Hall, Zachary; Takken, Willem; Slotman, Michel. “IDENTIFICATION OF CANDIDATE GENES UNDERLYING HUMAN HOST PREFERENCE IN THE MALARIA MOSQUITO ANOPHELES COLUZZII. AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, Volume 99, Number 4, Pages 21-22, AMER SOC TROP MED & HYGIENE 8000 WESTPARK DR, STE 130, MCLEAN, VA 22101 USA, 2018.”
Popkin-Hall, Zachary R; Cosme, Luciano V; Athrey, Giridhar; Slotman, Michel A. “CHEMOSENSORY GENE EXPRESSION IN THE PROBOSCIS OF ANOPHELES GAMBIAE SL MOSQUITOES WITH VARYING HOST PREFERENCE. AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, Volume 97, Number 5, Pages 237-238, AMER SOC TROP MED & HYGIENE 8000 WESTPARK DR, STE 130, MCLEAN, VA 22101 USA, 2017.”
Athrey, Giridhar; Cosme, Luciano V; Popkin-Hall, Z; Pathikonda, Sharmila; Takken, W; Slotman, Michel A. “Chemosensory gene expression in olfactory organs of the anthropophilic Anopheles coluzzii and zoophilic Anopheles quadriannulatus. BMC genomics, Volume 18, Number 1, Pages 1-14, 2017.”
Deitz, Kevin C; Athrey, Giridhar A; Jawara, Musa; Overgaard, Hans J; Matias, Abrahan; Slotman, Michel A. “Genome-wide divergence in the West-African malaria vector Anopheles melas. G3: Genes, Genomes, Genetics, Volume 6, Number 9, Pages 2867-2879, 2016.”
Athrey, Giridhar; Lance, Richard F; Leberg, Paul L. “Using Genealogical Mapping and Genetic Neighborhood Sizes to Quantify Dispersal Distances in the Neotropical Passerine, the Black-Capped Vireo. PLoS ONE, Volume 10, Number doi:10.1371/ journal.pone.0140115, Pages 20, 2015.”
Walter, Scott T; Carloss, Michael R; Hess, Thomas J; Leberg, Paul L; others. “Brown Pelican (Pelecanus occidentalis) colony initiation attempts: translocations and decoys. Waterbirds, Volume 36, Number 1, Pages 53-62, 2013.”
Walter, Scott T; Carloss, Michael R; Hess, Thomas J; Athrey, Giri; Leberg, Paul L. “Movement patterns and population structure of the brown pelican. The Condor, Volume 115, Number 4, Pages 788-799, 2013.”
Hodges, Theresa K; Athrey, Giridhar; Deitz, Kevin C; Overgaard, Hans J; Matias, Abrahan; Caccone, Adalgisa; Slotman, Michel A. “Large fluctuations in the effective population size of the malaria mosquito Anopheles gambiae ss during vector control cycle. Evolutionary applications, Volume 6, Number 8, Pages 1171-1183, 2013.”
Deitz, Kevin C; Athrey, Giri; Reddy, Michael R; Overgaard, Hans J; Matias, Abrahan; Jawara, Musa; Torre, Alessandra Della; Petrarca, Vincenzo; Pinto, João; Kiszewski, Anthony E; others. “Genetic isolation within the malaria mosquito Anopheles melas. Molecular Ecology, Volume 22, Number 14, Pages 3878-3878, 2013.”
Deitz, Kevin C; Athrey, Giri; Reddy, Michael R; Overgaard, Hans J; Matias, Abrahan; Jawara, Musa; Della Torre, Alessandra; Petrarca, Vincenzo; Pinto, João; E. Kiszewski, Anthony; others. “Genetic isolation within the malaria mosquito Anopheles melas. Molecular Ecology, Volume 21, Number 18, Pages 4498-4513, 2012.”
Athrey, Giridhar; Barr, Kelly R; Lance, Richard F; Leberg, Paul L. “Birds in space and time: genetic changes accompanying anthropogenic habitat fragmentation in the endangered black-capped vireo (Vireo atricapilla). Evolutionary Applications, 2012.”
Athrey, Giridhar; Hodges, Theresa K; Reddy, Michael R; Overgaard, Hans J; Matias, Abrahan; Ridl, Frances C; Kleinschmidt, Immo; Caccone, Adalgisa; Slotman, Michel A. “The effective population size of malaria mosquitoes: Large impact of vector control. PLoS Genetics, 2012.”
ATHREY, GIRI; LANCE, RICHARD F; LEBERG, PAUL L. “How far is too close? restricted, sex-biased dispersal in black-capped vireos. Molecular Ecology, 2012.”
Athrey, G; Hodges, TK; Reddy, MR; Overgaard, HJ; Matias, A; others. “The Effective Population Size of Malaria Mosquitoes: Large Impact of Vector, 2012.”
Barr, Kelly R; Athrey, Giri; Lindsay, Denise L; Lance, Richard F; Hayden, Timothy J; Tweddale, Scott A; Leberg, Paul L. “Missing the forest for the gene trees: conservation genetics is more than the identification of distinct population segments. The Auk, Volume 128, Number 4, Pages 792-794, 2011.”
Athrey, Giridhar; Lindsay, Denise L; Lance, Richard F; Leberg, Paul L. “Crumbling diversity: comparison of historical archived and contemporary natural populations indicate reduced genetic diversity and increasing genetic differentiation in the golden-cheeked warbler. Conservation Genetics, Volume 12, Pages 1345-1355, 2011.”
Athrey, Giridhar; Hodges, Theresa, Reddy, Michael; Arnez, Abrahan; Overgaard, Hans; Atue, Moises; Abaga, Simon; Caccone, Adalgisa; Slotman, Michel. “The Impact of Anti-Vector Interventions on the Effective Population Size of Malaria Mosquitoes. American Society of Tropical Medicine and Hygiene, Pages 280, 2011.”
Athrey, Giridhar; Badamchi-Zadeh, Alex; Lindsey, Michael; Balle II, Larry; Castro, Jonathan; Reddy, Vamsi; Slotman, Michel A. “The Molecular Evolution of Olfaction Genes in the Anopheles gambiae Complex. American Society for Tropical Medicine and Hygeine, Volume 83, Number 5s, Pages 230, 2010.”
Leberg, Paul L; Athrey, Giridhar NR; Barr, Kelly R; Lindsay, D; Lance, R. “Implications of landscape alteration for the conservation of genetic diversity of endangered species. Molecular insights into natural resource conservation and management, Pages 212-238, 2009.”
Fike, Jennifer A; Athrey, Giri; Bowman, Reed; Leberg, Paul L; Rhodes, Olin E. “Development of twenty-five polymorphic microsatellite markers for the endangered red-cockaded woodpecker (Picoides borealis). Conservation genetics, Volume 10, Pages 1021-1023, 2009.”
Athrey, Giridhar NR. “Birds in time and space: Patterns and processes of spatiotemporal genetics in two endangered songbirds. University of Louisiana at Lafayette, 2009.”
Barr, Kelly R; Lindsay, Denise L; Athrey, Giri; Lance, Richard F; Hayden, Timothy J; Tweddale, Scott A; Leberg, Paul L. “Population structure in an endangered songbird: maintenance of genetic differentiation despite high vagility and significant population recovery. Molecular Ecology, Volume 17, Number 16, Pages 3628-3639, 2008.”
Athrey, NR Giridhar; Lindsay, Denise; Barr, Kelly; Leberg, Paul. “PS 61-80: Determining barriers to fine-scale dispersal in two endangered migratory songbirds, 2007.”
Athrey, Giridhar NR; Leberg, Paul L; Klerks, Paul L. “Laboratory culturing and selection for increased resistance to cadmium reduce genetic variation in the least killifish, Heterandria formosa. Environmental Toxicology and Chemistry, Volume 26, Number 9, Pages 1916-1921, 2007.”